Longitudinal monitoring of sewershed resistomes in socioeconomically diverse urban neighbourhoods

Author:

Parkins Michael1ORCID,Lee Jangwoo1,Xiang Kevin1,Au Emily1,Sarabi Shahrzad1,Acosta Nicole1,Bhatnagar Srijak2ORCID,Doorn Jennifer Van1,Bertazzon Stefania1ORCID,Conly John1,Rennert-May Elissa1,Pitout Johann1,Lee Bonita3,Pang Xiaoli1,O'Grady Christine1,Frankowski Kevin1,Hubert Casey1ORCID

Affiliation:

1. University of Calgary

2. Athabasca University

3. Alberta Provinical Laboratory for Public Health

Abstract

Abstract

Understanding factors associated with antimicrobial resistance (AMR) distribution across populations is a necessary step in planning optimal mitigation measures. While associations between AMR and socioeconomic-status (SES), including factors like income, employment, education, have been increasingly recognized in low- and middle-income settings, this interplay is less clear in high-income countries. We explored the relationship between SES and AMR in Calgary, Canada using spatially-resolved wastewater-based surveillance of resistomes detected by metagenomics across socio-economically diverse urban neighbourhoods. Conducting this comparison during the height of COVID-related international travel restrictions (Dec.2020-Oct.2021) allowed the hypotheses linking SES and AMR to be assessed with limited confounding. Wastewater metagenomes from eight diverse neighbourhoods exhibited highly similar resistomes, with no quantitative differences (p > 0.05), low Bray-Curtis dissimilarity, and no significant correlations with SES. By comparison, dissimilarity was observed between globally-sourced resistomes from 244 cities (p < 0.05), underscoring the homogeneity of resistomes in Calgary’s sub-populations. The analysis of globally-sourced resistomes alongside Calgary resistome further revealed lower AMR burden in Calgary relative to other cities around the world was particularly pronounced for some of the most clinically-relevant AMR genes (e.g., beta-lactamases, macrolide-lincosamide-streptogramin). This work showcases the effectiveness of inclusive and comprehensive wastewater-based surveillance for exploring the interplay between SES and AMR.

Publisher

Research Square Platform LLC

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