On-the-fly Raman microscopy guaranteeing the accuracy of discrimination

Author:

Tabata Koji12,Kawagoe Hiroyuki3,Taylor J. Nicholas1,Mochizuki Kentaro4ORCID,Kubo Toshiki3ORCID,Clement Jean-Emmanuel2,Kumamoto Yasuaki35ORCID,Harada Yoshinori4ORCID,Nakamura Atsuyoshi6,Fujita Katsumasa357,Komatsuzaki Tamiki12589ORCID

Affiliation:

1. Research Center of Mathematics for Social Creativity, Research Institute for Electronic Science, Hokkaido University, Sapporo 001–0020, Hokkaido, Japan

2. Institute for Chemical Reaction Design and Discovery, Hokkaido University, Sapporo 001–0021, Hokkaido, Japan

3. Department of Applied Physics, Osaka University, Suita 565–0871, Osaka, Japan

4. Department of Pathology and Cell Regulation, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto 602–8566, Kyoto, Japan

5. Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Suita 565–0871, Osaka, Japan

6. Graduate School of Information Science and Technology, Hokkaido University, Sapporo 060–0814, Hokkaido, Japan

7. Advanced Photonics and Biosensing Open Innovation Laboratory, AIST-Osaka University, Suita 565–0871, Osaka, Japan

8. Graduate School of Chemical Sciences and Engineering Materials Chemistry, and Engineering Course, Hokkaido University, Sapporo 060–0812, Hokkaido, Japan

9. The Institute of Scientific and Industrial Research, Osaka University, Ibaraki 567-0047, Osaka, Japan

Abstract

Accelerating the measurement for discrimination of samples, such as classification of cell phenotype, is crucial when faced with significant time and cost constraints. Spontaneous Raman microscopy offers label-free, rich chemical information but suffers from long acquisition time due to extremely small scattering cross-sections. One possible approach to accelerate the measurement is by measuring necessary parts with a suitable number of illumination points. However, how to design these points during measurement remains a challenge. To address this, we developed an imaging technique based on a reinforcement learning in machine learning (ML). This ML approach adaptively feeds back “optimal” illumination pattern during the measurement to detect the existence of specific characteristics of interest, allowing faster measurements while guaranteeing discrimination accuracy. Using a set of Raman images of human follicular thyroid and follicular thyroid carcinoma cells, we showed that our technique requires 3,333 to 31,683 times smaller number of illuminations for discriminating the phenotypes than raster scanning. To quantitatively evaluate the number of illuminations depending on the requisite discrimination accuracy, we prepared a set of polymer bead mixture samples to model anomalous and normal tissues. We then applied a home-built programmable-illumination microscope equipped with our algorithm, and confirmed that the system can discriminate the sample conditions with 104 to 4,350 times smaller number of illuminations compared to standard point illumination Raman microscopy. The proposed algorithm can be applied to other types of microscopy that can control measurement condition on the fly, offering an approach for the acceleration of accurate measurements in various applications including medical diagnosis.

Funder

MEXT | Japan Science and Technology Agency

MEXT | Japan Society for the Promotion of Science

Grant-in-Aid for Scientific Research on Innovative Areas

Publisher

Proceedings of the National Academy of Sciences

Cited by 2 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. On-the-fly Raman microscopy guaranteeing the accuracy of discrimination;Biomedical Spectroscopy, Microscopy, and Imaging III;2024-06-20

2. Flow zoometry ofDrosophila;2024-04-05

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