Structure of the priming arabinosyltransferase AftA required for AG biosynthesis ofMycobacterium tuberculosis

Author:

Gong Yicheng1,Wei Chuancun1,Wang Jun12,Mu Nengjiang1ORCID,Lu Qinhong1ORCID,Wu Chengyao1ORCID,Yan Ning1ORCID,Yang Huifang1,Zhao Yao1ORCID,Yang Xiuna1ORCID,Gurcha Sudagar S.3,Veerapen Natacha3,Batt Sarah M.3,Hao Zhiqiang4,Da Lintai4,Besra Gurdyal S.3ORCID,Rao Zihe15ORCID,Zhang Lu1ORCID

Affiliation:

1. Shanghai Institute for Advanced Immunochemical Studies, School of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China

2. School of Life Sciences, Tianjin University, Tianjin 300072, China

3. Institute of Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham B15 2TT, United Kingdom

4. Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai 200240, China

5. Laboratory of Structural Biology, Tsinghua University, Beijing 100084, China

Abstract

Arabinogalactan (AG) is an essential cell wall component in mycobacterial species, including the deadly human pathogenMycobacterium tuberculosis. It plays a pivotal role in forming the rigid mycolyl–AG–peptidoglycan core for in vitro growth. AftA is a membrane-bound arabinosyltransferase and a key enzyme involved in AG biosynthesis which bridges the assembly of the arabinan chain to the galactan chain. It is known that AftA catalyzes the transfer of the first arabinofuranosyl residue from the donor decaprenyl-monophosphoryl-arabinose to the mature galactan chain (i.e., priming); however, the priming mechanism remains elusive. Herein, we report the cryo-EM structure ofMtbAftA. The detergent-embedded AftA assembles as a dimer with an interface maintained by both the transmembrane domain (TMD) and the soluble C-terminal domain (CTD) in the periplasm. The structure shows a conserved glycosyltransferase-C fold and two cavities converging at the active site. A metal ion participates in the interaction of TMD and CTD of each AftA molecule. Structural analyses combined with functional mutagenesis suggests a priming mechanism catalyzed by AftA inMtbAG biosynthesis. Our data further provide a unique perspective into anti-TB drug discovery.

Funder

UKRI | Medical Research Council

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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