Novel antiinflammatory biologics shaped by parasite–host coevolution

Author:

Ryan Stephanie M.1,Ruscher Roland1ORCID,Johnston Wayne A.2,Pickering Darren A.1ORCID,Kennedy Malcolm W.3ORCID,Smith Brian O.4ORCID,Jones Linda1,Buitrago Geraldine1,Field Matt A.1ORCID,Esterman Adrian J.15,McHugh Connor P.1,Browne Daniel J.1,Cooper Martha M.1ORCID,Ryan Rachael Y. M.1,Doolan Denise L.1ORCID,Engwerda Christian R.6,Miles Kim1,Mitreva Makedonka7ORCID,Croese John18ORCID,Rahman Tony8,Alexandrov Kirill2,Giacomin Paul R.1,Loukas Alex1

Affiliation:

1. Australian Institute of Tropical Health and Medicine, James Cook University, Cairns, QLD 4878, Australia

2. Commonwealth Scientific and Industrial Research Organisation–Queensland University of Technology Synthetic Biology Alliance, Australian Research Council Centre of Excellence in Synthetic Biology, Centre for Agriculture and the Bioeconomy, Centre for Genomics and Personalised Health, School of Biology and Environmental Science, Queensland University of Technology; Brisbane, QLD 4000, Australia

3. Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom

4. Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom

5. Clinical and Health Sciences, University of South Australia, Adelaide, SA 5001, Australia

6. Division of Infectious Diseases, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4006, Australia

7. Division of Infectious Diseases, Department of Medicine, Washington University in St, Louis, St. Louis, MO 63110

8. Department of Gastroenterology and Hepatology, Prince Charles Hospital, Brisbane, QLD 4032, Australia

Abstract

Parasitic helminth infections, while a major cause of neglected tropical disease burden, negatively correlate with the incidence of immune-mediated inflammatory diseases such as inflammatory bowel diseases (IBD). To evade expulsion, helminths have developed sophisticated mechanisms to regulate their host’s immune responses. Controlled experimental human helminth infections have been assessed clinically for treating inflammatory conditions; however, such a radical therapeutic modality has challenges. An alternative approach is to harness the immunomodulatory properties within the worm’s excretory–secretory (ES) complement, its secretome. Here, we report a biologics discovery and validation pipeline to generate and screen in vivo a recombinant cell-free secretome library of helminth-derived immunomodulatory proteins. We successfully expressed 78 recombinant ES proteins from gastrointestinal hookworms and screened the crude in vitro translation reactions for anti-IBD properties in a mouse model of acute colitis. After statistical filtering and ranking, 20 proteins conferred significant protection against various parameters of colitis. Lead candidates from distinct protein families, including annexins, transthyretins, nematode-specific retinol-binding proteins, and SCP/TAPS were identified. Representative proteins were produced in mammalian cells and further validated, including ex vivo suppression of inflammatory cytokine secretion by T cells from IBD patient colon biopsies. Proteins identified herein offer promise as novel, safe, and mechanistically differentiated biologics for treating the globally increasing burden of inflammatory diseases.

Funder

Department of Health | National Health and Medical Research Council

Australian Research Centre of Excellence in Synthetic Biology

CSIRO-QUT

Merchant Charitable Foundation

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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