Multiscale modeling of HBV infection integrating intra- and intercellular viral propagation to analyze extracellular viral markers

Author:

Kitagawa Kosaku,Kim Kwang Su,Iwamoto Masashi,Hayashi Sanae,Park Hyeongki,Nishiyama Takara,Nakamura NaotoshiORCID,Fujita Yasuhisa,Nakaoka Shinji,Aihara Kazuyuki,Perelson Alan S.,Allweiss Lena,Dandri Maura,Watashi Koichi,Tanaka Yasuhito,Iwami ShingoORCID

Abstract

Chronic infection with hepatitis B virus (HBV) is caused by the persistence of closed circular DNA (cccDNA) in the nucleus of infected hepatocytes. Despite available therapeutic anti-HBV agents, eliminating the cccDNA remains challenging. Thus, quantifying and understanding the dynamics of cccDNA are essential for developing effective treatment strategies and new drugs. However, such study requires repeated liver biopsy to measure the intrahepatic cccDNA, which is basically not accepted because liver biopsy is potentially morbid and not common during hepatitis B treatment. We here aimed to develop a noninvasive method for quantifying cccDNA in the liver using surrogate markers in peripheral blood. We constructed a multiscale mathematical model that explicitly incorporates both intracellular and intercellular HBV infection processes. The model, based on age-structured partial differential equations, integrates experimental data from in vitro and in vivo investigations. By applying this model, we roughly predicted the amount and dynamics of intrahepatic cccDNA within a certain range using specific viral markers in serum samples, including HBV DNA, HBsAg, HBeAg, and HBcrAg. Our study represents a significant step towards advancing the understanding of chronic HBV infection. The noninvasive quantification of cccDNA using our proposed method holds promise for improving clinical analyses and treatment strategies. By comprehensively describing the interactions of all components involved in HBV infection, our multiscale mathematical model provides a valuable framework for further research and the development of targeted interventions.

Funder

Japan Society for the Promotion of Science

Scientific Research (KAKENHI) B

Scientific Research in Innovative Areas

the Ministry of Education, Culture, Sports, Science, and Technology

AMED Strategic International Brain Science Research Promotion Program

AMED

AMED CREST

AMED Development of Vaccines for the Novel Coronavirus Disease

AMED Japan Program for Infectious Diseases Research and Infrastructure

AMED Research Program on Emerging and Re-emerging Infectious Diseases

AMED Research Program on HIV/AIDS

AMED Program for Basic and Clinical Research on Hepatitis

AMED Program on the Innovative Development and the Application of New Drugs for Hepatitis B

Laboratoire d'Excellence en Recherche sur le Médicament et l'Innovation Thérapeutique

AMED International Collaborative Research Program Strategic International Collaborative Research Program

AMED Research Program on Hepatitis

JST MIRAI

JST-Mirai Program

Moonshot Research and Development Program

The national research foundation of korea

National Institutes of Health grants

Smoking Research Foundation

The Takeda Science Foundation

Taiju Life Social Welfare Foundation

Shin-Nihon of Advanced Medical Research

SECOM Science and Technology Foundation

The Japan Prize Foundation

Publisher

Public Library of Science (PLoS)

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