HAT: Hypergraph analysis toolbox

Author:

Pickard JoshuaORCID,Chen CanORCID,Salman Rahmy,Stansbury Cooper,Kim Sion,Surana Amit,Bloch Anthony,Rajapakse IndikaORCID

Abstract

Recent advances in biological technologies, such as multi-way chromosome conformation capture (3C), require development of methods for analysis of multi-way interactions. Hypergraphs are mathematically tractable objects that can be utilized to precisely represent and analyze multi-way interactions. Here we present the Hypergraph Analysis Toolbox (HAT), a software package for visualization and analysis of multi-way interactions in complex systems.

Funder

Air Force Office of Science and Research

NSF

MathWorks

Publisher

Public Library of Science (PLoS)

Subject

Computational Theory and Mathematics,Cellular and Molecular Neuroscience,Genetics,Molecular Biology,Ecology,Modeling and Simulation,Ecology, Evolution, Behavior and Systematics

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