Affiliation:
1. Federal State Budget Sciences Institution «Federal Williams Research Center of Forage Production and Agroecology»
Abstract
Forage annual and perennial grasses are the difficult subject for molecular and genetic studies because of the problem with obtaining qualitative genomic DNA for PCR, due of high content of proteins, polysaccharides and polyphenols. The known methods of DNA extraction or the numerous commercial kits allow isolating purified nucleic acids from the leaf tissue, but characterized by low efficiency at seedlings using. The modified method of DNA isolation, based on the SDS-extraction buffer (sodium dodecil sulfate), is presented in this study. Significant modifications were introduced in the reagents compound and the steps of procedure accordingly to used type of plant tissue and the result was positive at usage on the bulking samples, as well as on the individual genotypes (the only seedling). Reliability of this method and the functionality of the obtained DNA samples were tested in PCR with different molecular markers (SSR, SRAP and PawS) in researches on revealing of forage legume grasses DNA polymorphism. The general advantages of the proposed method are simplicity and effectiveness, the possibility to isolate qualitative DNA without toxic reagents application, as well as relatively low cost and availability of reagents. This method can be useful for studying the genetic biodiversity and for decision the different tasks, required the rapid analysis of large plant populations.
Publisher
Federal Williams Research Center of Forage Production and Agroecology
Reference45 articles.
1. Agbagwa I.O., Datta S., Patil P.G., Singh P., Nadarajan N. A protocol for high-quality genomic DNA extraction from legumes // Genetic Molecular Research. 2012. V. 11 (4). P. 4632–4639. (doi: 10.4238/2012)., Agbagwa I.O., Datta S., Patil P.G., Singh P., Nadarajan N. A protocol for high-quality genomic DNA extraction from legumes // Genetic Molecular Research. 2012. V. 11 (4). P. 4632–4639. (doi: 10.4238/2012).
2. Петров Д.Г., Макарова Е.Д., Гермаш Н.Н., Антифеев И.Е. Методы выделения и очистки ДНК // Научное приборостроение. – 2019. – Т. 29, № 4. – С. 28–50., Petrov D.G., Makarova E.D., Germash N.N., Antifeev I.E. Metody vydeleniya i ochistki DNK // Nauchnoe priborostroenie. – 2019. – T. 29, № 4. – S. 28–50.
3. Ansari I.A., Khan M.S. An efficient protocol for isolation of high quality genomic DNA from seeds of apple cultivars (Malus domestica) for random amplified polymorphic DNA (RAPD) analysis // Pharm. Crop. 2012. V. 3. P. 78–83., Ansari I.A., Khan M.S. An efficient protocol for isolation of high quality genomic DNA from seeds of apple cultivars (Malus domestica) for random amplified polymorphic DNA (RAPD) analysis // Pharm. Crop. 2012. V. 3. P. 78–83.
4. Kumari V., Bansal A., Aminedi R., Taneja D. and Das N. Simplified extraction of good quality genomic DNA from a variety of plant materials // African Journal Biotechnology. 2012. V. 1 (24). P. 6420–6427. (DOI:10.5897/AJB11.2366)., Kumari V., Bansal A., Aminedi R., Taneja D. and Das N. Simplified extraction of good quality genomic DNA from a variety of plant materials // African Journal Biotechnology. 2012. V. 1 (24). P. 6420–6427. (DOI:10.5897/AJB11.2366).
5. Dellaporta S.L., Wood J., Hicks J.B. A plant DNA minipreparation: Version II // Plant Molecular Biology Reporter. 1983. V. 1 (4). P. 19–21. (DOI: 10.1007/BF02712670)., Dellaporta S.L., Wood J., Hicks J.B. A plant DNA minipreparation: Version II // Plant Molecular Biology Reporter. 1983. V. 1 (4). P. 19–21. (DOI: 10.1007/BF02712670).
Cited by
1 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献