Draft genome of a biological control agent against Bipolaris sorokiniana, the causal phytopathogen of spot blotch in wheat (Triticum turgidum L. subsp. durum): Bacillus inaquosorum TSO22-Reference-Cited by-同舟云学术

Draft genome of a biological control agent against Bipolaris sorokiniana, the causal phytopathogen of spot blotch in wheat (Triticum turgidum L. subsp. durum): Bacillus inaquosorum TSO22

Published:2024-01-01 Issue:1 Volume:9 Page:
ISSN:2391-9531
Container-title:Open Agriculture
language:en
Short-container-title:

Author:

Morales-Sandoval Pamela Helué¹²,Valenzuela-Ruíz Valeria²,Santoyo Gustavo³,Hyder Sajjad⁴,Mitra Debasis⁵,Zelaya-Molina Lily X.⁶,Ávila-Alistac Norma⁷,Parra-Cota Fannie Isela⁸,Santos-Villalobos Sergio de los²

Affiliation:

1. Facultad de Biología, Universidad Veracruzana, González Aguirre-Beltrán , 91090 , Xalapa , Veracruz , Mexico

2. Departamento de Ciencias Agronómicas y Veterinarias, Instituto Tecnológico de Sonora , 5 de febrero 818 sur, 85000 , Ciudad Obregón , Sonora , Mexico

3. Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo , 58030 , Morelia , Mexico

4. Department of Botany, Government College Women University , Sialkot , 51040 , Pakistan

5. Department of Microbiology, Graphic Era (Deemed to be University) , 566/6, Bell Road , Clement Town Dehradun , 248002, Uttarakhand , India

6. Centro Nacional de Recursos Genéticos, Insituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias (INIFAP) , Blvd. de la Biodiversidad No. 400 , C.P. 47600 , Tepatitlán de Morelos , Jalisco , Mexico

7. Departamento de Fitotecnia, Universidad Autónoma Chapingo , Km 38.5, Carretera México-Texcoco , Chapingo , Estado de México. C.P. 56230 , Mexico

8. Campo Experimental Norman E. Borlaug, Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias (INIFAP) , Norman E. Borlaug Km. 12, C. P. 85000 , Cd. Obregón , Sonora , Mexico

Abstract

Abstract Strain TSO22 was isolated from bulk soil associated with wheat crops in the Yaqui Valley, Mexico. The draft genome contained 4,294,671 bp, 43.7% G + C content, 731,759 bp N50, 3 L50, and 29 contigs. Based on 16S rRNA gene sequencing, the overall genome relatedness index, and phylogenomic relationship, strain TSO22 is highly affiliated with Bacillus inaquosorum. Genome annotation revealed 94 RNAs and 4,465 predicted coding DNA sequences distributed in 336 subsystems, in which genes involved in plant growth promotion and biocontrol were detected, such as colonizing plant system, competitive exclusionist, control of biotic and abiotic stresses, and plant immune response stimulation. Genomic predictions were confirmed through in vitro analysis, which revealed that B. inaquosorum TSO22 has great biological control against Bipolaris sorokiniana, as well as excellent metabolic capabilities to improve plant growth and development.

Publisher

Walter de Gruyter GmbH

Link

https://www.degruyter.com/document/doi/10.1515/opag-2022-0309/pdf

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