Transcriptome analyses reveal the expression profile of genes related to lignan biosynthesis in Anthriscus sylvestris L. Hoffm. Gen

Author:

Shan Chunmiao,Zhao Liqiang,Shi Yuanyuan,Zhang Shengxiang,Wu Huan,Yang Mo,Yang Qingshan,Wu Jiawen

Funder

Natural Science Research Grant of Higher Education of Anhui Province

National Key Research and Development Program

National Key R&D Program of China

Natural Science Foundation of Anhui Province of China

National Project Cultivation Fund of Anhui University of Chinese Medicine

Publisher

Springer Science and Business Media LLC

Subject

Plant Science,Molecular Biology,Physiology

Reference64 articles.

1. Akira, S, Jun M, Erika M, Shin M, Eiichiro O (2016) De novo transcriptomes of forsythia koreana using a novel assembly method: insight into tissue- and species-specific expression of lignan biosynthesis-related gene. Plos ONE

2. Anthony B, Marc L, Bjoern, Usadel (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics (Oxford, England)

3. Audic S, Claverie JM (1997) The significance of digital gene expression profiles. Genome Res 7:986

4. Bhattacharyya D, Hazra S, Banerjee A, Datta R, Kumar D, Chakrabarti S, Chattopadhyay S (2016) Transcriptome-wide identification and characterization of CAD isoforms specific for podophyllotoxin biosynthesis from Podophyllum hexandrum. Plant Mol Biol 92:1–23

5. Bo, LiColin & Dewey (2011) RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. Bmc Bioinformatics.

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