Genome-wide identification of SNPs and copy number variation in common bean (Phaseolus vulgaris L.) using genotyping-by-sequencing (GBS)-Reference-Cited by-同舟云学术

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Genome-wide identification of SNPs and copy number variation in common bean (Phaseolus vulgaris L.) using genotyping-by-sequencing (GBS)

Published:2016-06-22 Issue:7 Volume:36 Page:
ISSN:1380-3743
Container-title:Molecular Breeding
language:en
Short-container-title:Mol Breeding

Author:

Ariani Andrea,Berny Mier y Teran Jorge Carlos,Gepts Paul

Funder

U.S. Department of Agriculture

Publisher

Springer Science and Business Media LLC

Subject

Plant Science,Genetics,Agronomy and Crop Science,Molecular Biology,Biotechnology

Link

http://link.springer.com/content/pdf/10.1007/s11032-016-0512-9.pdf

Reference53 articles.

1. Ali OA, O’Rourke SM, Amish SJ, Meek MH, Luikart G, Jeffres C, Miller MR (2016) RAD capture (Rapture): flexible and efficient sequence-based genotyping. Genetics 202:389–400

2. Altmann A, Weber P, Bader D, Preuss M, Binder EB, Mϋller-Myhsok B (2012) A beginners guide to SNP calling from high-throughput DNA-sequencing data. Hum Genet 131:1451–1454

3. Altshuler D, Pollare VJ, Cowles CR, Van Etten WJ, Baldwin J, Linton L, Landes ES (2000) An SNP map of the human genome generated by reduced representation shotgun sequencing. Nature 407:513–516

4. Baird NA, Etter PD, Atwood TS, Currey MC, Shiver AL, Lewis ZA, Selker EU, Cresko WA, Johnson EA (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE 3:e3376

5. Beebe S, Ramirez J, Jarvis A, Rao MI, Mosquera G, Bueno JM, Blair MW (2011) Genetic improvement of common beans and the challenges of climate change. In: Yadav SS, Redden RJ, Hatfield JL, Lotze-Campen H, Hall AE (eds) Crop adaption to climate change. Wiley-Blackwell, Oxford, pp 356–369

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