Comprehensive metagenomic analysis of stress-resistant and -sensitive Listeria monocytogenes

Author:

Hong Hyunhee,Yang Seung Min,Kim Eiseul,Kim Hyun Jung,Park Si HongORCID

Funder

Korea Food Research Institute

Publisher

Springer Science and Business Media LLC

Subject

Applied Microbiology and Biotechnology,General Medicine,Biotechnology

Reference34 articles.

1. Abdelhamed H, Lawrence ML, Ramachandran R, Karsi A (2019) Validation of predicted virulence factors in Listeria monocytogenes identified using comparative genomics. Toxins 11(9):508. https://doi.org/10.3390/toxins11090508

2. Alcock BP, Raphenya AR, Lau TT, Tsang KK, Bouchard M, Edalatmand A, Huynh W, Nguyen AV, Cheng AA, Liu S, Min SY, Miroshnichenko A, Tran HK, Werfalli RE, Nasir JA, Oloni M, Speicher DJ, Florescu A, Singh B, Faltyn M, Hernandez-Koutoucheva A, Sharma AN, Bordeleau E, Pawlowski AC, Zubyk HL, Dooley D, Griffiths E, Maguire F, Winsor GL, Beiko RG, Brinkman FSL, Hsiao WWL, Domselaar GV, McArthur AG (2020) CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database. Nucleic Acids Res 48(D1):D517–D525. https://doi.org/10.1093/nar/gkz935

3. Arcari T, Feger ML, Guerreiro DN, Wu J, O’Byrne CP (2020) Comparative review of the responses of Listeria monocytogenes and Escherichia coli to low pH stress. Genes 11(11):1330. https://doi.org/10.3390/genes11111330

4. Bae D, Liu C, Zhang T, Jones M, Peterson SN, Wang C (2012) Global gene expression of Listeria monocytogenes to salt stress. J Food Prot 75(5):906–912

5. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, Sirotkin AV, Vyahhi N, Tesler G, Alekseyev MA, Pevzner PA (2012) SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. Comput Biol 19(5):455–477. https://doi.org/10.1089/cmb.2012.0021

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