Tree Decomposition and Parameterized Algorithms for RNA Structure-Sequence Alignment Including Tertiary Interactions and Pseudoknots
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Publisher
Springer Berlin Heidelberg
Link
http://link.springer.com/content/pdf/10.1007/978-3-642-33122-0_12
Reference13 articles.
1. Arnborg, S., Corneil, D., Proskurowski, A.: Complexity of finding embeddings in a k-tree. SIAM J. Alg. Disc. Meth. 8(2), 277–284 (1987)
2. Blin, G., Denise, A., Dulucq, S., Herrbach, C., Touzet, H.: Alignment of RNA structures. IEEE/ACM Transactions on Computational Biology and Bioinformatics 7(2), 309–322 (2010)
3. Lecture Notes in Computer Science;H.L. Bodlaender,1997
4. Gotoh, O.: An improved algorithm for matching biological sequences. J. Mol. Biol. 162(3), 705–708 (1982)
5. Han, B., Dost, B., Bafna, V., Zhang, S.: Structural alignment of pseudoknotted RNA. Journal of Computational Biology 15(5), 489–504 (2008)
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