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The Sedimentary Ancient DNA Workflow

  • Published:2023 Issue: Volume: Page:53-84
  • ISSN:1571-5299
  • Container-title:Tracking Environmental Change Using Lake Sediments
  • language:
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Author:

Heintzman Peter D.,Nota Kevin,Rouillard Alexandra,Lammers Youri,Murchie Tyler J.,Armbrecht Linda,Garcés-Pastor Sandra,Vernot Benjamin

Publisher

Springer International Publishing

Reference131 articles.

1. Alpaslan-Roodenberg S, Anthony D, Babiker H, Bánffy E, Booth T, Capone P, Deshpande-Mukherjee A, Eisenmann S, Fehren-Schmitz L, Frachetti M, Fujita R, Frieman CJ, Fu Q, Gibbon V, Haak W, Hajdinjak M, Hofmann KP, Holguin B, Inomata T, Kanzawa-Kiriyama H, Keegan W, Kelso J, Krause J, Kumaresan G, Kusimba C, Kusimba S, Lalueza-Fox C, Llamas B, MacEachern S, Mallick S, Matsumura H, Morales-Arce AY, Matuzeviciute GM, Mushrif-Tripathy V, Nakatsuka N, Nores R, Ogola C, Okumura M, Patterson N, Pinhasi R, Prasad SPR, Prendergast ME, Punzo JL, Reich D, Sawafuji R, Sawchuk E, Schiffels S, Sedig J, Shnaider S, Sirak K, Skoglund P, Slon V, Snow M, Soressi M, Spriggs M, Stockhammer PW, Szécsényi-Nagy A, Thangaraj K, Tiesler V, Tobler R, Wang C-C, Warinner C, Yasawardene S, Zahir M (2021) Ethics of DNA research on human remains: five globally applicable guidelines. Nature 599(7883):41–46. https://doi.org/10.1038/s41586-021-04008-x

2. Alsos IG, Lammers Y, Yoccoz NG, Jørgensen T, Sjögren P, Gielly L, Edwards ME (2018) Plant DNA metabarcoding of lake sediments: how does it represent the contemporary vegetation. PLoS One 13(4):e0195403. https://doi.org/10.1371/journal.pone.0195403

3. Alsos IG, Sjögren P, Brown AG, Gielly L, Merkel MKF, Paus A, Lammers Y, Edwards ME, Alm T, Leng M, Goslar T, Langdon CT, Bakke J, van der Bilt WGM (2020) Last Glacial Maximum environmental conditions at Andøya, northern Norway; evidence for a northern ice-edge ecological “hotspot.”. Quat Sci Rev 239:106364. https://doi.org/10.1016/j.quascirev.2020.106364

4. Alsos IG, Rijal DP, Ehrich D, Karger DN, Yoccoz NG, Heintzman PD, Brown AG, Lammers Y, Pellissier L, Alm T, Bråthen KA, Coissac E, Merkel MKF, Alberti A, Denoeud F, Bakke J, Phylonorway Consortium (2022) Postglacial species arrival and diversity buildup of northern ecosystems took millennia. Sci Adv 8(39):eabo7434. https://doi.org/10.1126/sciadv.abo7434

5. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215(3):403–410. https://doi.org/10.1016/S0022-2836(05)80360-2

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